Information for 9-GTAGAGCCAA (Motif 10)

C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A
Reverse Opposite:
G C A T A C G T A C T G A C T G T G A C A C G T A G T C C G A T G T C A G T A C
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.841
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif232.4
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets93.2 +/- 63.6bp
Average Position of motif in Background96.4 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTAGAGCCAA-
--CGTGCCAAG
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTAGAGCCAA----
----AGCCAATCGG
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTAGAGCCAA--
--GGTGCCAAGT
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTAGAGCCAA---
-ACTAGCCAATCA
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTAGAGCCAA
GRTGMTRGAGCC--
 A C G T A C G T A C G T A C G T C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTAGAGCCAA
GGAACAGCCG-
 A C G T C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T

NFIC/MA0161.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTAGAGCCAA---
--NNTGCCAAGNN
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTAGAGCCAA
-AAAAGTCAA
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTAGAGCCAA
---CAGCC--
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTAGAGCCAA
-ATAATCCC-
 C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T