Information for 7-TTGGCAGG (Motif 13)

A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
Reverse Opposite:
A T G C A T G C A C G T A C T G A G T C A G T C C T G A C G T A
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.902
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif1338.5
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets96.5 +/- 57.4bp
Average Position of motif in Background98.5 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAGG
NNTTGGCANN
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAGG
NTTGGCANN
 A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---TTGGCAGG
TACTTGGCAGA
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAGG
CTTGGCAA-
 A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAGG
GGTTGGCAT-
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TTGGCAGG
TTGACAGC
 A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAGG
VGCTGGCA--
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTGGCAGG
TTGACAGG
 A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCAGG-----
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCAGG-----
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T