Information for 17-GCCATGCTGGCC (Motif 24)

A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
Reverse Opposite:
T C A G T A C G G T A C G A T C C G T A A C T G T G A C G T C A A C G T C T A G A T C G A T G C
p-value:1e-5
log p-value:-1.222e+01
Information Content per bp:1.721
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif540.7
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets98.3 +/- 52.6bp
Average Position of motif in Background102.2 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGCTGGCC
GCNGCCATCTTG---
 A C G T A C G T A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCATGCTGGCC-
AGGNCANNGTGACCT
 A C G T A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCATGCTGGCC--
GGTCANNGTGACCTN
 A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCATGCTGGCC
TGCCCTGAGGGCA
 A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGCTGGCC
GCCGCCATCTTG---
 A C G T A C G T A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCATGCTGGCC
TGCCCTGAGGGCA
 A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCATGCTGGCC
TGCCCTGAGGGCA
 A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCCATGCTGGCC
--CCTGCTGAGH
 A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCATGCTGGCC--
TCNCCTGCTGNGNNN
 A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGCTGGCC
SCAGYCADGCATGAC
 A C G T A C G T A C G T A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C