Information for 18-GGTTAGGGTTAG (Motif 25)

A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G
Reverse Opposite:
G T A C G A C T C G T A C G T A G T A C G T A C G A T C C G A T G T C A G T C A G T A C G T A C
p-value:1e-4
log p-value:-1.148e+01
Information Content per bp:1.804
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.9 +/- 54.0bp
Average Position of motif in Background96.2 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)18.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PSE(SNAPc)/K562-mStart-Seq/Homer

Match Rank:1
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGTTAGGGTTAG--
CTTTTHRSTTAKGGTGABTW
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G A C G T A C G T
G A T C G C A T C A G T C G A T G C A T G C T A T C A G T A G C G C A T A G C T C T G A A C G T C T A G C T A G A G C T C T A G C T G A A T G C G A C T G C A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGTTAGGGTTAG
--TGTCGGTT--
 A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T

IRF5/MA1420.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTTAGGGTTAG-
AGTTTCGGTTTCGG
 A C G T A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G A C G T
T C G A A C T G C A G T G C A T A C G T A G T C C T A G C T A G G A C T C G A T G C A T G T A C T C A G C T A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGTTAGGGTTAG-
-----GGATTAGC
 A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGGGTTAG-
NTGGTTTCGGTTNNN
 A C G T A C G T A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGTTAGGGTTAG
--TTGCGGTTT-
 A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTTAGGGTTAG
AGGTCAAGGTCA-
 A C G T A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

IRF4/MA1419.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGGGTTAG-
TAGTTTCGGTTTCGG
 A C G T A C G T A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G A C G T
G C A T C T G A A T C G C A G T G C A T A C G T A G T C C T A G T A C G C G A T G C A T C A G T A G T C C T A G C T A G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGTTAGGGTTAG
NMMNBAAAGGGTTAA
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGTTAGGGTTAG
-NNTGTGGTTT-
 A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T