Information for 3-CAGCTGYTNN (Motif 3)

A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
Reverse Opposite:
T C G A A T C G T C G A T C A G G T A C C T G A C A T G G T A C C G A T A T C G
p-value:1e-16
log p-value:-3.838e+01
Information Content per bp:1.643
Number of Target Sequences with motif268.0
Percentage of Target Sequences with motif29.91%
Number of Background Sequences with motif8897.8
Percentage of Background Sequences with motif18.28%
Average Position of motif in Targets102.2 +/- 52.2bp
Average Position of motif in Background99.3 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGYTNN
NCAGCTGCTG-
 A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:CAGCTGYTNN
CAGCTGTT--
 A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGYTNN
AGCAGCTGCTNN
 A C G T A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGYTNN
HCAGCTGDTN-
 A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGYTNN
MCAGCTGBYH-
 A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGYTNN
ACAGCTGTTV-
 A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGYTNN
NNGCAGCTGTC--
 A C G T A C G T A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGYTNN
NNGCAGCTGTT--
 A C G T A C G T A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGYTNN
AGCAGCTGCT--
 A C G T A C G T A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:CAGCTGYTNN
CAGCTGNT--
 A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T