Information for 10-GGCCGAGC (Motif 30)

A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.696e+00
Information Content per bp:1.972
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif424.3
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets98.2 +/- 51.2bp
Average Position of motif in Background100.2 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GGCCGAGC
GAGSCCGAGC
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAGC
AGGCCTAG-
 A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGCCGAGC
RGKGGGCGGAGC
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGAGC----
CAGGCCNNGGCCNN
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCCGAGC
--CGGAGC
 A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCCGAGC-
GGGGGCGGGGCC
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAGC
AGGCCTNG-
 A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCCGAGC-
----CAGCC
 A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGCCGAGC--
AGGGGGCGGGGCTG
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGAGC--
GGGGCGGGGCCR
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C A C G T A C G T
C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G