Information for 20-TGAGAGGTCA (Motif 33)

A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A G T A C A G T C A C G T A T G C A C G T A G T C C G T A
p-value:1e-3
log p-value:-6.964e+00
Information Content per bp:1.957
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif82.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets73.6 +/- 54.3bp
Average Position of motif in Background93.4 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:TGAGAGGTCA
--AGRGGTCA
 A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TGAGAGGTCA
GKBCARAGGTCA
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TGAGAGGTCA
--TRAGGTCA
 A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGAGAGGTCA
NRBCARRGGTCA
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGAGAGGTCA----
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGAGAGGTCA----
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGAGAGGTCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGAGAGGTCA----
-CAAAGGTCAAGGG
 A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGGTCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGAGAGGTCA-
-CAAAGKTCAA
 A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A