Information for 5-AAACAATGCAGC (Motif 4)

C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
Reverse Opposite:
A C T G A T G C A C G T A T C G T G A C T C G A A C G T A C G T A T C G A C G T A C G T A G C T
p-value:1e-15
log p-value:-3.592e+01
Information Content per bp:1.783
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets83.3 +/- 56.6bp
Average Position of motif in Background107.4 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAACAATGCAGC
NAACAAT-----
 C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAACAATGCAGC
GTAAACAAT-----
 A C G T A C G T C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGCAGC
VRAACAATGG---
 A C G T C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGCAGC
AAAACAATGG---
 A C G T C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AAACAATGCAGC
NNTNANAACAATTNNA-
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

SOX13/MA1120.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAACAATGCAGC
AAACAATGGCA-
 C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAACAATGCAGC
RAACAATGGN--
 C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGCAGC
RNAACAATGG---
 A C G T C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAACAATGCAGC
-AACAAT-----
 C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAACAATGCAGC-
ATAAACAATTAAACA
 A C G T A C G T C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A