Information for 7-AAGCCTTTGT (Motif 7)

C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T
Reverse Opposite:
C G T A G A T C C T G A C G T A C G T A C T A G C T A G G T A C G C A T C G A T
p-value:1e-11
log p-value:-2.712e+01
Information Content per bp:1.731
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif393.9
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets98.9 +/- 57.3bp
Average Position of motif in Background97.2 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:AAGCCTTTGT-
---CCTTTGTT
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.77
Offset:3
Orientation:forward strand
Alignment:AAGCCTTTGT-
---CCWTTGTY
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.75
Offset:3
Orientation:forward strand
Alignment:AAGCCTTTGT---
---CCTTTGTTTT
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AAGCCTTTGT---
---CCWTTGTYYB
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAGCCTTTGT--
--NCCATTGTTC
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCTTTGT------
NNNTCCTTTGTTCTNNN
 A C G T C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAGCCTTTGT------
ANTCCTTTGTCTNNNN
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AAGCCTTTGT---
--NNCTTTGTTNN
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCTTTGT------
TNNTCCTTTGTTCTNNT
 A C G T C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AAGCCTTTGT--
--NCCATTGTTY
 C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T