Information for 19-TTAATCTAAGAA (Motif 16)

A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C C G A T A C G T C G T A A C T G C G T A C G A T A C G T C G T A C G T A
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.897
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets115.2 +/- 45.0bp
Average Position of motif in Background44.3 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTAATCTAAGAA--
--TTTCTNAGAAAN
 A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTAATCTAAGAA
YTAATCCY----
 A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTAATCTAAGAA
TTAATCCT----
 A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTAATCTAAGAA
TTAATCCC----
 A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTAATCTAAGAA
TTTAAT-------
 A C G T A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTAATCTAAGAA--
---TTCTTGGAAAN
 A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTAATCTAAGAA
GCTAATCC-----
 A C G T A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTAATCTAAGAA
NYTAATCCYB---
 A C G T A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTAATCTAAGAA
CTTAATCCC----
 A C G T A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTAATCTAAGAA----
TCTTTCGAGGAATTTG
 A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G