Information for 9-AGTCCACA (Motif 19)

G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A
Reverse Opposite:
G C A T A C T G C G A T C T A G A C T G C G T A T G A C C G A T
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.785
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif19.66%
Number of Background Sequences with motif6061.0
Percentage of Background Sequences with motif12.49%
Average Position of motif in Targets96.1 +/- 55.0bp
Average Position of motif in Background100.5 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCACA--
SSAATCCACANN
 A C G T A C G T G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---AGTCCACA
TCCAATCCACA
 A C G T A C G T A C G T G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGTCCACA
-ATCCAC-
 G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------AGTCCACA--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGTCCACA---
NWAACCACADNN
 A C G T G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGTCCACA---
AAACCACAGAN
 G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A A C G T A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGTCCACA-
NAAACCACAG
 A C G T G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGTCCACA--
AAACCACANN
 G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A A C G T A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGTCCACA--
AAACCACAGC
 G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A A C G T A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGTCCACA
TRCATTCCAG-
 A C G T A C G T A C G T G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A
A G C T C T A G T G A C C G T A A C G T C G A T A G T C A G T C C T G A C A T G A C G T