Information for 22-CCAGCGAGGCAA (Motif 21)

A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
Reverse Opposite:
C G A T A C G T A C T G A G T C A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.761e+01
Information Content per bp:1.920
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.7 +/- 52.1bp
Average Position of motif in Background132.5 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCAGCGAGGCAA
RHHCAGAGAGGB--
 A C G T A C G T A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAGCGAGGCAA---
SCAGYCADGCATGAC
 A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCAGCGAGGCAA
CTCCCTGGGAGGCCN
 A C G T A C G T A C G T A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCAGCGAGGCAA
--HAWGRGGCCM
 A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCAGCGAGGCAA
----CTAGGCCT
 A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCGAGGCAA
TGCCCNNAGGGCA-
 A C G T A C G T A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGCGAGGCAA
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCAGCGAGGCAA----
-----AAGGCAAGTGT
 A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGCGAGGCAA
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCGAGGCAA-
TCCCAGMCRAGCCCC
 A C G T A C G T A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C