Information for 23-CAGCTACCCC (Motif 27)

A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A C T G
p-value:1e-2
log p-value:-5.607e+00
Information Content per bp:1.934
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif11.61%
Number of Background Sequences with motif4219.7
Percentage of Background Sequences with motif8.69%
Average Position of motif in Targets101.7 +/- 58.3bp
Average Position of motif in Background100.5 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCTACCCC-
TGCAGCTGTCCCT
 A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTACCCC
DGCAGCTGCYSS
 A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTACCCC-----
NNNNGGTACCCCCCANN
 A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

ASCL1/MA1100.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTACCCC
NNCCAGCTGCTNN
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C
A T G C T A C G T A G C T A G C T G C A A T C G T A G C G C A T A T C G A G T C G A C T A T C G A T G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCTACCCC
AGCAGCTGCTNN
 A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTACCCC
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTACCCC--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCTACCCC
AGCAGCTGCT--
 A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTACCCC----
GNNAGCTAATCCCCCN
 A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTACCCC
NNGCAGCTGTT--
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T