Information for 11-GTCACAAGGGAA (Motif 6)

C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A
Reverse Opposite:
C G A T A G C T A T G C G T A C A T G C G A C T A C G T A C T G C G A T C T A G C T G A G T A C
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.726
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif384.4
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets90.2 +/- 57.6bp
Average Position of motif in Background100.4 +/- 56.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCACAAGGGAA
NGTCCCNNGGGA-
 A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTCACAAGGGAA-
ANTCCCTNGGGAAT
 A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTCACAAGGGAA--
DBTCCCHWGGGAVTN
 A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A A C G T A C G T
C G T A A C G T A G C T A G T C G A T C G A T C G A C T C G T A C T A G C T A G T C A G T C G A T G A C G A C T C G A T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCACAAGGGAA
GTCACATGAY--
 C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTCACAAGGGAA
--AACAAAGG--
 C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCACAAGGGAA-
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCACAAGGGAA
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCACAAGGGAA-
BAGTCATANTGAAAG
 A C G T A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTCACAAGGGAA---
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCACAAGGGAA---
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C G T C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G