Information for 12-GCCAGTGTTTCC (Motif 7)

A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G G T C A C G T A C T G A A G T C G C T A G T A C C G A T A C T G A C T G A G T C
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.882
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets98.0 +/- 57.7bp
Average Position of motif in Background100.1 +/- 63.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCCAGTGTTTCC
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCAGTGTTTCC
-CCATTGTTYB-
 A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCAGTGTTTCC
NCCATTGTTY--
 A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTGTTTCC
NNCCATTGTNN--
 A C G T A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCAGTGTTTCC-
-CAGCTGTTTCCT
 A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C A C G T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCAGTGTTTCC
-CCATTGTTC--
 A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCAGTGTTTCC
NCCATTGTTC--
 A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCAGTGTTTCC
-CCTTTGTT---
 A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCCAGTGTTTCC
YCCDNTCCAGGTTTT--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCAGTGTTTCC
-CCATTGTTTT-
 A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T