Information for 10-GTGTCAKTAC (Motif 12)

C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C
Reverse Opposite:
T A C G A C G T C G T A T G A C A C G T C T A G G T C A G T A C C G T A A G T C
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.730
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif572.1
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets89.9 +/- 61.3bp
Average Position of motif in Background100.6 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGTCAKTAC-
-TTTCATTRCC
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C A C G T
A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGTCAKTAC
NTGTCAN---
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTCAKTAC--
NTTTCATTRCHD
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C A C G T A C G T
C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTGTCAKTAC-
---YCATTAMC
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C A C G T
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGTCAKTAC
NDGTAATTAC
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C
T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

PDX1/MA0132.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTGTCAKTAC
--GTAATTAG
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C
A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G

EVX2/MA0888.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGTCAKTAC-
-GGTAATTAGC
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C A C G T
A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

HOXB3/MA0903.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGTCAKTAC-
-ACTAATTAGC
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C A C G T
A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTGTCAKTAC-
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

HOXA2/MA0900.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGTCAKTAC-
-CCTAATTACC
 C T A G C G A T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A T G C A C G T
A C G T T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C