Information for 12-AGACAGGCTCCT (Motif 20)

C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C T G A G T C A T G C A C G T A C T G A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.630e+01
Information Content per bp:1.949
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.2 +/- 53.9bp
Average Position of motif in Background134.2 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGGCTCCT
CCAGACRSVB----
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGGCTCCT
CCAGACAG------
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGACAGGCTCCT-----
ATGCCACGCCCCTTTTTG
 A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGACAGGCTCCT
------GCTCCG
 C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGACAGGCTCCT
TTGACAGG-----
 A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGACAGGCTCCT
TCTAGACA-------
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AGACAGGCTCCT
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGACAGGCTCCT
TTGACAGC-----
 A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGGCTCCT
BCAGACWA------
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGACAGGCTCCT
-----NGCTN--
 C G T A A C T G C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T