Information for 8-TGCAATTA (Motif 21)

G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A
Reverse Opposite:
A G C T C G T A T C G A C G A T A G C T C T A G A T G C C G T A
p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.668
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif12.61%
Number of Background Sequences with motif3751.8
Percentage of Background Sequences with motif7.73%
Average Position of motif in Targets98.1 +/- 56.4bp
Average Position of motif in Background100.3 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Msx3/MA0709.1/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-CCAATTAA
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

Dlx2/MA0885.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-GCAATTAA
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

MSX2/MA0708.1/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-CCAATTAA
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

MSX1/MA0666.1/Jaspar

Match Rank:4
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-CCAATTAG
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

Dlx4/MA0881.1/Jaspar

Match Rank:5
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-CCAATTAC
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.83
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-GCACTTAA
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

Dlx3/MA0880.1/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-CCAATTAC
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

GBX2/MA0890.1/Jaspar

Match Rank:8
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TGCAATTA--
ACCAATTAGC
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T A C G T
T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C

DLX6/MA0882.1/Jaspar

Match Rank:9
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TGCAATTA-
-CCAATTAC
 G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T
A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---TGCAATTA-----
ACCGGCAATTAATAAA
 A C G T A C G T A C G T G C A T A T C G A G T C C T G A G C T A A G C T C G A T C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A