Information for 13-AGGTATCACACT (Motif 23)

C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C G T A C T G G C T A A C G T C G T A A G T C A G T C A C G T
p-value:1e-5
log p-value:-1.371e+01
Information Content per bp:1.944
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 47.2bp
Average Position of motif in Background133.6 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGGTATCACACT-
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGGTATCACACT-
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGGTATCACACT-
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGGTATCACACT-
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGGTATCACACT
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGGTATCACACT-
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGTATCACACT-
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGTATCACACT-
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGGTATCACACT-
-----TCACACCT
 C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGTATCACACT-----
NNTTTTCACACCTTNNN
 C G T A A C T G C T A G A C G T C G T A C G A T A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C