Information for 2-AGGTCCTACAGT (Motif 3)

C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T A C T G A C G T C G T A A C T G A C T G C T G A A T G C G A T C A C G T
p-value:1e-13
log p-value:-3.149e+01
Information Content per bp:1.890
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.6 +/- 43.5bp
Average Position of motif in Background138.6 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGTCCTACAGT----
TNNTGCTACTGTNNNN
 C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGTCCTACAGT----
CNNNGCTACTGTANNN
 C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGTCCTACAGT----
-RGMCCTACTRTGTGC
 C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

PH0066.1_Hoxc11/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGTCCTACAGT--
TAAAGTCGTAAAATAG
 A C G T A C G T C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGTCCTACAGT--
TAAAGTCGTAAAACGT
 A C G T A C G T C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGTCCTACAGT--
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGGTCCTACAGT
------CACAGN
 C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGGTCCTACAGT
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGGTCCTACAGT---
CAAGGTCGTAAAATCTT
 A C G T A C G T C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGGTCCTACAGT--
TAAAGTCGTAAAACAT
 A C G T A C G T C G T A C A T G A T C G A G C T G T A C A G T C A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T