Information for 20-ATACATACRTAC (Motif 33)

C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
Reverse Opposite:
A C T G A G C T C G T A A G T C A C T G A C G T C G T A A C G T A C T G A C G T C G T A A C G T
p-value:1e-2
log p-value:-5.124e+00
Information Content per bp:1.902
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets130.2 +/- 30.1bp
Average Position of motif in Background114.4 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ATACATACRTAC
TNNATTATGCATANNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATACATACRTAC
NTTGATACATT-----
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ATACATACRTAC
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATACATACRTAC--
YATGCATATRCATRT
 A C G T C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

ZNF24/MA1124.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATACATACRTAC
CATTCATTCATTC
 A C G T C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATACATACRTAC
ATGMATATDC--
 C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ATACATACRTAC-
-----TACGTGCV
 C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATACATACRTAC
GACCACATTCATACAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ATACATACRTAC
TCTTTATATATAAATA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATACATACRTAC
----RTACGTGC
 C G T A A C G T C G T A G T A C C G T A A C G T C G T A G T A C C T A G A C G T C T G A G T A C
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C