Information for 3-CCTGTGGGCT (Motif 4)

G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T
Reverse Opposite:
G T C A T C A G T A G C T A G C G T A C G C T A G A T C C T G A T A C G C T A G
p-value:1e-11
log p-value:-2.707e+01
Information Content per bp:1.647
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif11.74%
Number of Background Sequences with motif2757.7
Percentage of Background Sequences with motif5.68%
Average Position of motif in Targets98.2 +/- 55.3bp
Average Position of motif in Background99.0 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CCTGTGGGCT-
TCACCTCTGGGCAG
 A C G T A C G T A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGGCT
GTCTGTGGTTT
 A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGGGCT-
NNHTGTGGTTWN
 A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGGGCT-
GCCTCAGGGCAT
 A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGGCT
TGCCCNGGGGCA
 A C G T A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGGCT-
SCCTSAGGSCAW
 A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGGCT
TGCCCTNGGGCA
 A C G T A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGGCT
TGCCCTNGGGCA
 A C G T A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCTGTGGGCT
TGCCCTGAGGGCA
 A C G T A C G T A C G T G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTGTGGGCT
GCTGTGGTTT
 G A T C A T G C G A C T C T A G C G A T C A T G A T C G A T C G A G T C C A G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T