Information for 3-AAAWTCACTCAC (Motif 6)

C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G C G T A A C T G A C G T A C T G C G T A C G T A A C G T C A G T A C G T
p-value:1e-11
log p-value:-2.626e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.7 +/- 66.1bp
Average Position of motif in Background142.7 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAWTCACTCAC---
GAAGATCAATCACTTA
 A C G T C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAWTCACTCAC-
--AGCCACTCAAG
 C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAWTCACTCAC---
GAAGATCAATCACTAA
 A C G T C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAWTCACTCAC
GAAATGACTCA-
 C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAWTCACTCAC---
NNCATTCATTCATNNN
 A C G T C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAAWTCACTCAC
--AAGCACTTAA
 C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

JUN(var.2)/MA0489.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAWTCACTCAC
AGGAGATGACTCAT
 A C G T A C G T C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAWTCACTCAC
--MRSCACTYAA
 C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAWTCACTCAC
TAATTTAATCA-
 C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAWTCACTCAC
CAAATCACTG--
 C G T A G C T A C G T A C G A T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A T G C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T