Information for 7-GCCCTGACCC (Motif 8)

C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C
Reverse Opposite:
A C T G T A C G T C A G A G C T G A T C G T C A T C A G A C T G A T C G G T A C
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.704
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif12.83%
Number of Background Sequences with motif3283.3
Percentage of Background Sequences with motif6.77%
Average Position of motif in Targets109.4 +/- 54.2bp
Average Position of motif in Background102.0 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCCCTGACCC------
NNCNTGACCCCGCTCT
 C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCCTGACCC------
NNNNTGACCCGGCGCG
 C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTGACCC
TGACCTTGACCT
 A C G T A C G T C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTGACCC
TGACCTTGACCT
 A C G T A C G T C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCCCTGACCC
----TGACCT
 C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCCTGACCC------
TGTCGTGACCCCTTAAT
 A C G T C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCCCTGACCC------
----TGACCYYTGVYN
 C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCCCTGACCC--
----TGACCYCT
 C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCCTGACCC
-NCGTGACN-
 C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

PAX5/MA0014.3/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCCTGACCC-
GAGCGTGACCCC
 A C G T C A T G T A G C T G A C A G T C A C G T C T A G C T G A A G T C A T G C T G A C A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C