Information for 5-TGAATTTCWCAT (Motif 9)

C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T
Reverse Opposite:
T G C A G A C T A C T G C G A T A C T G C G T A G T C A C G T A A G C T C G A T A G T C G C T A
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.782
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets115.9 +/- 48.4bp
Average Position of motif in Background84.3 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGAATTTCWCAT
TCACTTTCAC--
 C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T
G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGAATTTCWCAT--
--ACTTTCACTTTC
 C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGAATTTCWCAT
GGGAATTTCC---
 A C G T C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAATTTCWCAT
GGGAATTTCC---
 A C G T C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGAATTTCWCAT
-CGGTTTCAAA-
 C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGAATTTCWCAT-
---HTTTCCCASG
 C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAATTTCWCAT---
TNAGTTTCGATTTTN
 C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATTTCWCAT
NNTNTCATGAATGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAATTTCWCAT---
TCAGTTTCATTTTCC
 C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T A C G T A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAATTTCWCAT------
-NNTTTTCACACCTTNNN
 C G A T A C T G C G T A C T G A A C G T A C G T A C G T A G T C G C T A G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C