Information for 9-TCCTSYGCAGGC (Motif 10)

G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C
Reverse Opposite:
C A T G G A T C T G A C C G A T A C T G G T A C C T G A A T C G C G T A C T A G C T A G C T G A
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.696
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif8.25%
Number of Background Sequences with motif1159.9
Percentage of Background Sequences with motif2.40%
Average Position of motif in Targets96.2 +/- 56.9bp
Average Position of motif in Background101.4 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCCTSYGCAGGC
-DCTCAGCAGG-
 G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCTSYGCAGGC--
--CACAGCAGGGGG
 G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCCTSYGCAGGC--
--CTGCGCATGCGC
 G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T A C G T
A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCTSYGCAGGC--
CCACACAGCAGGAGA
 A C G T G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCCTSYGCAGGC----
-DCHCAGCAGGRGGCC
 G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCTSYGCAGGC--
CCACACAGCAGGAGA
 A C G T G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCCTSYGCAGGC--
---TGCGCAGGCGC
 G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T A C G T
A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCTSYGCAGGC--
GAGCACAGCAGGACA
 A C G T G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TCCTSYGCAGGC-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCTSYGCAGGC
WDNCTGGGCA---
 A C G T G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T