Information for 12-RCCCCACCCA (Motif 20)

C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A
Reverse Opposite:
G C A T A C T G C A T G C T A G C G A T C A T G A T C G C T A G A T C G A G C T
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.762
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif6.48%
Number of Background Sequences with motif926.0
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets116.9 +/- 50.9bp
Average Position of motif in Background102.0 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:1
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--RCCCCACCCA---
NRGCCCCRCCCHBNN
A C G T A C G T C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF5/MA0599.1/Jaspar

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:RCCCCACCCA
GCCCCGCCCC
C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-RCCCCACCCA
GGCCACACCCA
A C G T C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:RCCCCACCCA
-CCCCCCCC-
C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A
A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:RCCCCACCCA
GCCACACCCA
C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-RCCCCACCCA-
GGCCACACCCAN
A C G T C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:RCCCCACCCA
GCCMCRCCCH
C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---RCCCCACCCA---
TCGACCCCGCCCCTAT
A C G T A C G T A C G T C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---RCCCCACCCA---
CTATCCCCGCCCTATT
A C G T A C G T A C G T C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A A C G T A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-RCCCCACCCA-
GGCCACRCCCMK
A C G T C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G