Information for 24-TGAGAGGGCACA (Motif 31)

A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C C G T A
p-value:1e-4
log p-value:-9.811e+00
Information Content per bp:1.931
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.8 +/- 62.8bp
Average Position of motif in Background134.9 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGAGAGGGCACA
--NGTGGGCAT-
 A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGGGCACA
CTTGAGTGGCT---
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAGGGCACA---
NNNNTTGGGCACNNCN
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGAGAGGGCACA
AGGGGTCAGAGGTCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAGGGCACA
TTGAGTGSTT---
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAGAGGGCACA
TTGACAGC-----
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGAGAGGGCACA
--AGRGGTCA--
 A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGAGAGGGCACA-
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGAGAGGGCACA
--TRAGGTCA--
 A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAGAGGGCACA
HAWGRGGCCM--
 A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T