Information for 5-CAGGCCTGGGYT (Motif 5)

A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T
Reverse Opposite:
C G T A C T A G A T G C A T G C G T A C C G T A C T A G A T C G A T G C G A T C G A C T A C T G
p-value:1e-13
log p-value:-3.133e+01
Information Content per bp:1.678
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif12.57%
Number of Background Sequences with motif2065.5
Percentage of Background Sequences with motif4.27%
Average Position of motif in Targets107.1 +/- 52.4bp
Average Position of motif in Background96.4 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTGGGYT--
CAGGCCNNGGCCNN
 A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGGGYT
-AGGCCTNG---
 A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGGGYT
-AGGCCTAG---
 A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCTGGGYT-
ACATGCCCGGGCAT
 A C G T A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCCTGGGYT
CACAGN--------
 A C G T A C G T A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAGGCCTGGGYT
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A C G T A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGGCCTGGGYT
--WDNCTGGGCA
 A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGGCCTGGGYT-
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGGCCTGGGYT-
CAAAGGCGTGGCCAG
 A C G T A C G T A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGGCCTGGGYT-
YCCDNTCCAGGTTTT
 A C G T A C G T A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T A C G T
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T