Information for 3-CTGGGCTCBG (Motif 9)

G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G
Reverse Opposite:
A G T C T C G A C T A G C G T A A C T G A G T C G T A C T G A C G C T A A C T G
p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.719
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif11.00%
Number of Background Sequences with motif1840.4
Percentage of Background Sequences with motif3.80%
Average Position of motif in Targets109.4 +/- 52.5bp
Average Position of motif in Background100.1 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGGGCTCBG
CTGACCTTTG
 G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCTCBG
WDNCTGGGCA---
 A C G T A C G T A C G T G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTGGGCTCBG
----GCTCCG
 G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTGGGCTCBG
---NGCTN--
 G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGGGCTCBG-------
-TGGACTTTGNNCTNTG
 G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGGGCTCBG------
-TGGACTTTGNNCTCN
 G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCTCBG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTGGGCTCBG---
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGGGCTCBG
CTGTTCCTGG
 G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGGGCTCBG
TTGAMCTTTG
 G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G