Homer de novo Motif Results (CTL_Hip_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 200278
Total background sequences = 197780
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A G T C T A G T C G A C G A T A C T G G C T A A T C G C G A T T G A C G C T A A G C T G C T A 1e-21449-4.939e+0427.12%5.42%46.3bp (62.6bp)Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.993)
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motif file (matrix)
2 G A T C A G T C C G T A A T G C G A C T C T G A A C T G C T A G A C G T A C T G C A T G G A T C 1e-4353-1.002e+044.24%0.55%42.6bp (57.8bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.919)
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motif file (matrix)
3 C A T G G C A T C G A T G C A T G A T C G A T C G C T A A T G C 1e-1393-3.209e+0336.71%28.44%55.9bp (59.2bp)NFAT5/MA0606.1/Jaspar(0.924)
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motif file (matrix)
4 C T G A T C G A C T G A A T G C C T G A T A C G G A T C G A C T A G T C G C A T 1e-1247-2.872e+0361.30%52.90%55.4bp (61.8bp)POL010.1_DCE_S_III/Jaspar(0.668)
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motif file (matrix)
5 T A G C G A C T A T C G G A C T C A T G A T C G A C G T G A C T C G A T T C A G 1e-1198-2.759e+0337.67%29.91%55.1bp (60.6bp)RUNX1/MA0002.2/Jaspar(0.940)
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motif file (matrix)
6 C T G A A G C T A G C T G A C T G A T C C G A T A C T G A G T C A G T C C G T A C T G A T C A G 1e-1183-2.725e+0320.19%14.14%54.3bp (61.0bp)NFIX/MA0671.1/Jaspar(0.939)
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motif file (matrix)
7 C T G A A G T C A C G T A T G C C G A T T A C G G C T A T C G A 1e-1119-2.577e+0355.28%47.28%57.0bp (63.0bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.693)
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motif file (matrix)
8 C A T G T C A G G T C A T C G A C G A T C T A G G A C T C A G T G C A T C G T A 1e-1013-2.335e+0335.13%28.12%56.5bp (59.7bp)TEAD2/MA1121.1/Jaspar(0.805)
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motif file (matrix)
9 T C G A T C A G C A T G T A C G C G T A T C G A C A G T C A T G 1e-975-2.247e+0348.35%40.94%56.4bp (62.0bp)RELB/MA1117.1/Jaspar(0.719)
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motif file (matrix)
10 A G T C A T G C T A G C T A G C C G T A A C T G C T A G A C T G T C G A C T A G 1e-948-2.185e+0345.69%38.44%56.3bp (58.6bp)EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer(0.729)
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motif file (matrix)
11 C G A T C T A G C G A T C A G T G A C T C T G A G A T C G C T A A G T C C G T A C T A G A G T C 1e-821-1.892e+0318.81%13.85%54.9bp (59.1bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.876)
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motif file (matrix)
12 T A C G T C G A T C A G A G T C G A T C C T A G A C T G G A T C 1e-618-1.425e+0327.90%22.78%56.3bp (61.6bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.675)
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motif file (matrix)
13 C A T G T C A G T C G A A C G T A C T G C G T A A G T C T A C G A C G T A G T C C G T A A G C T 1e-576-1.327e+032.56%1.14%50.0bp (61.3bp)c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.976)
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motif file (matrix)
14 G A C T C G A T C G A T G C T A T G C A C G T A C A T G A T G C 1e-487-1.122e+0342.02%36.88%57.5bp (60.1bp)PH0158.1_Rhox11_2/Jaspar(0.744)
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motif file (matrix)
15 T A C G G A T C A G C T A T G C T A G C T A C G T C G A A T C G A T G C A T G C G C T A T C A G 1e-421-9.697e+0222.14%18.25%54.8bp (59.8bp)NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer(0.658)
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motif file (matrix)
16 A T G C G C T A T C A G T C A G A T G C G A T C G T A C G T A C C T A G A T G C A G T C G A T C 1e-409-9.420e+0213.02%10.00%53.9bp (56.3bp)KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer(0.925)
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motif file (matrix)
17 C T A G C T G A A C G T A C G T A C G T C G T A A G C T A C T G 1e-250-5.778e+024.03%2.71%57.1bp (58.2bp)Hoxc9/MA0485.1/Jaspar(0.898)
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motif file (matrix)
18 C G T A A G T C G A T C T C A G A G T C A G C T C T G A A C T G C G T A A G T C A G T C G T C A 1e-88-2.030e+020.07%0.01%45.7bp (78.4bp)Smad4/MA1153.1/Jaspar(0.653)
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motif file (matrix)
19 T C A G C G T A C T G A G C A T T A C G A T C G C G T A T C G A C G A T A T C G T A C G C G T A 1e-86-1.986e+020.08%0.01%51.0bp (55.0bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.695)
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motif file (matrix)
20 A C T G C G T A A C T G A G T C C G T A C T A G A C T G A C G T C G T A C G T A A C G T A G T C 1e-55-1.272e+020.04%0.00%56.8bp (29.3bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.661)
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motif file (matrix)
21 C G T A C G T A A G T C A T G C A G T C A C G T C G T A C G T A A G T C A G T C 1e-15-3.649e+012.66%2.37%57.3bp (58.9bp)PSE(SNAPc)/K562-mStart-Seq/Homer(0.621)
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motif file (matrix)
22 * C T A G C T A G G C A T C T A G C T A G G C A T C T A G T C A G A C G T C T A G C T A G G C A T 1e-1-4.082e+000.07%0.06%54.1bp (46.4bp)PB0196.1_Zbtb7b_2/Jaspar(0.627)
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motif file (matrix)