Homer de novo Motif Results (OA_Hip_open_peaks_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 198112
Total background sequences = 195174
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G T C G A G A C T A C T G C G T A T A C G C G A T T G A C C T G A A G C T 1e-21058-4.849e+0429.02%6.34%46.5bp (64.7bp)JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer(0.995)
More Information | Similar Motifs Found
motif file (matrix)
2 G T A C A G T C C G T A T A G C G A C T C G T A A C T G C T G A C A T G A C T G C A T G G A T C 1e-3640-8.383e+034.29%0.70%43.3bp (58.6bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.917)
More Information | Similar Motifs Found
motif file (matrix)
3 A G T C C T G A A C T G A C G T T A C G C G T A A G T C G A C T 1e-2409-5.549e+0327.13%17.58%54.6bp (65.6bp)Pax2/MA0067.1/Jaspar(0.714)
More Information | Similar Motifs Found
motif file (matrix)
4 C T A G T C G A A C G T A C T G C T G A T G A C G T C A C G A T G T A C C G T A A C G T G A T C 1e-1576-3.629e+037.67%3.59%51.2bp (62.3bp)JUN/MA0488.1/Jaspar(0.940)
More Information | Similar Motifs Found
motif file (matrix)
5 C G T A A C G T A C G T A C G T A G T C A G T C G C A T A T C G 1e-1569-3.614e+0334.44%25.83%56.3bp (59.8bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.920)
More Information | Similar Motifs Found
motif file (matrix)
6 T G A C T C A G A G T C C G A T A C T G T A G C A G T C C G A T 1e-1450-3.340e+0347.77%38.74%55.5bp (63.9bp)ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer(0.700)
More Information | Similar Motifs Found
motif file (matrix)
7 A G C T A G C T T C G A A T G C G C A T T G A C C G T A T A C G C T G A T C A G T A G C G C T A 1e-1345-3.098e+0325.83%18.64%55.4bp (62.6bp)BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer(0.588)
More Information | Similar Motifs Found
motif file (matrix)
8 A G C T A C G T A C T G A T G C G T A C C G T A C T G A T C G A 1e-1289-2.970e+0330.11%22.62%55.4bp (62.4bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.960)
More Information | Similar Motifs Found
motif file (matrix)
9 C A G T T C A G A G C T A C G T A C G T C T G A A G T C G C A T G A T C C G T A C T A G A T G C 1e-953-2.197e+0313.77%9.19%54.7bp (59.6bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.929)
More Information | Similar Motifs Found
motif file (matrix)
10 G C A T C T G A T C G A A G T C A G T C C G T A G T A C C G T A 1e-870-2.005e+0322.99%17.40%54.3bp (62.8bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.939)
More Information | Similar Motifs Found
motif file (matrix)
11 T A G C G C T A C A T G A G T C G T A C A T G C G C A T A C T G 1e-721-1.662e+0344.80%38.45%55.5bp (63.8bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.676)
More Information | Similar Motifs Found
motif file (matrix)
12 C G A T A T C G T G C A A G T C G C A T A C T G A G T C G A C T 1e-676-1.558e+0330.90%25.34%56.3bp (64.9bp)PH0169.1_Tgif1/Jaspar(0.791)
More Information | Similar Motifs Found
motif file (matrix)
13 T C A G T C A G A T G C A G T C G T A C G A T C C T A G A T G C A T G C A G T C 1e-547-1.261e+0321.42%17.05%53.6bp (56.3bp)KLF5/MA0599.1/Jaspar(0.941)
More Information | Similar Motifs Found
motif file (matrix)
14 T G A C C T A G C T A G A T C G C G T A T C G A C T G A T A C G A T G C G T A C 1e-547-1.260e+0332.12%27.03%55.6bp (60.7bp)REL/MA0101.1/Jaspar(0.729)
More Information | Similar Motifs Found
motif file (matrix)
15 T A G C C A T G T A G C A T G C T G A C A C T G T A G C A C T G T C A G T A C G 1e-195-4.493e+0216.89%14.48%55.6bp (55.9bp)HINFP/MA0131.2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
16 C G T A A C G T A C G T A T G C A G T C C G T A A C G T A C G T A G T C T A G C C G T A A C G T 1e-186-4.299e+020.15%0.02%56.9bp (58.2bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
17 G C A T T C G A T G A C G A T C T C A G A G T C G C A T C T G A T C A G T G C A T A G C G A T C 1e-110-2.554e+020.07%0.00%45.0bp (37.4bp)Smad4/MA1153.1/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
18 C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T 1e-71-1.656e+020.04%0.00%52.5bp (83.0bp)PB0005.1_Bbx_1/Jaspar(0.624)
More Information | Similar Motifs Found
motif file (matrix)