Homer de novo Motif Results (OA_Knee_peaks_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 193656
Total background sequences = 191355
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G T C G A G A C T C A T G G C T A T A C G C G A T T G A C C T G A A G C T 1e-22999-5.296e+0430.66%6.37%46.4bp (64.2bp)JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer(0.994)
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motif file (matrix)
2 G T A C G T A C C G T A A T G C G A C T C T G A C T A G C T A G C A T G C T A G A C T G G T A C 1e-3816-8.787e+033.96%0.54%43.2bp (56.9bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.915)
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motif file (matrix)
3 A T C G C A G T C T A G T A C G G T C A G C T A C T G A C G T A 1e-1610-3.708e+0355.61%45.84%55.8bp (60.5bp)NFAT5/MA0606.1/Jaspar(0.887)
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motif file (matrix)
4 T C G A A C G T A C T G C G T A C A G T A T C G G A C T G T C A C G T A A G C T 1e-1563-3.600e+039.95%5.17%52.2bp (62.0bp)JUN/MA0488.1/Jaspar(0.899)
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motif file (matrix)
5 T A C G C T G A C T A G G T A C C G A T A C T G C T G A A T G C G A C T A T G C 1e-1516-3.493e+0334.83%26.22%55.2bp (63.3bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.829)
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motif file (matrix)
6 C T G A A C G T A C G T C T A G A T G C C G A T G T C A C G T A 1e-1228-2.829e+0317.62%11.77%55.5bp (61.3bp)MF0006.1_bZIP_cEBP-like_subclass/Jaspar(0.788)
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motif file (matrix)
7 G C A T C T G A T C G A T G A C A G T C C G T A A T G C C G T A T C A G C A T G 1e-1062-2.447e+0316.80%11.44%54.1bp (60.9bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.966)
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motif file (matrix)
8 C G T A C T A G A T C G T C A G G C T A C T A G C A G T C T A G 1e-1021-2.351e+0339.16%31.78%55.5bp (61.1bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.845)
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motif file (matrix)
9 A T C G A T G C G C A T A T C G A G C T A G C T C A T G T A C G G T A C C G T A 1e-891-2.054e+0347.46%40.27%55.1bp (62.9bp)NFIA/MA0670.1/Jaspar(0.785)
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motif file (matrix)
10 A G C T A C G T A C T G A T G C A G T C G C A T T C A G A T C G T G A C G C T A 1e-773-1.781e+0335.75%29.46%54.6bp (62.1bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.717)
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motif file (matrix)
11 C A T G A T G C G A T C G T C A C T G A T C A G C T G A C T G A G T C A G T C A C T G A A G T C 1e-691-1.592e+0312.33%8.54%55.1bp (59.5bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.823)
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motif file (matrix)
12 T C G A C G T A C G T A C G T A A G T C C G T A A C T G A G T C 1e-678-1.563e+0327.93%22.50%57.9bp (60.1bp)FOXD2/MA0847.1/Jaspar(0.825)
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motif file (matrix)
13 T C A G C T A G T A C G G A T C C T A G C A T G C T A G T A C G A T G C A G T C C T A G T A C G 1e-420-9.685e+0216.99%13.47%53.6bp (54.3bp)Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer(0.919)
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motif file (matrix)
14 T C A G A C G T C T A G C T G A A T G C A T C G A G C T A T G C 1e-263-6.057e+026.57%4.80%53.1bp (62.5bp)CREB1/MA0018.3/Jaspar(0.900)
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motif file (matrix)
15 T A C G A T G C A G T C T G A C C A T G A T G C C T A G T A C G 1e-234-5.393e+0219.43%16.60%55.6bp (56.8bp)PB0088.1_Tcfap2e_1/Jaspar(0.683)
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motif file (matrix)
16 C G T A A G T C G A T C C T A G A G T C A G C T C T G A A C T G C G T A A G T C A G T C G T C A 1e-95-2.202e+020.09%0.01%46.6bp (56.9bp)Smad4/MA1153.1/Jaspar(0.650)
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motif file (matrix)
17 A T C G C T G A C T G A G A C T T A C G T A C G C G T A T C G A A G C T A T C G T A C G C T G A 1e-58-1.355e+020.11%0.03%50.5bp (63.8bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.694)
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motif file (matrix)