Homer de novo Motif Results (atac_oa_knee_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 30310
Total background sequences = 29850
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A G T T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T 1e-4617-1.063e+0438.44%8.13%50.2bp (68.2bp)Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.993)
More Information | Similar Motifs Found
motif file (matrix)
2 G C A T C A T G A C T G C T A G C T G A T C G A G C T A C G A T A G C T A G T C A G T C G T A C 1e-491-1.132e+037.88%2.55%52.1bp (62.2bp)NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer(0.945)
More Information | Similar Motifs Found
motif file (matrix)
3 G T A C C T G A A G T C C G A T A G C T A G T C A G T C A C G T A T C G A G C T 1e-387-8.911e+0223.81%14.63%55.3bp (64.2bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.954)
More Information | Similar Motifs Found
motif file (matrix)
4 A T C G A C G T A G T C C G T A A C T G A G C T T A G C G A T C C G A T T A C G 1e-378-8.717e+0231.27%21.03%55.1bp (69.4bp)POL002.1_INR/Jaspar(0.752)
More Information | Similar Motifs Found
motif file (matrix)
5 C T A G T C A G C T A G G C A T A C T G C A G T C A T G A C T G G T A C G A T C 1e-320-7.371e+0211.83%5.97%52.5bp (61.2bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.950)
More Information | Similar Motifs Found
motif file (matrix)
6 G A C T C G T A C T G A A G T C T A G C C G T A T G A C C G T A 1e-315-7.256e+0228.83%19.72%55.3bp (65.3bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.948)
More Information | Similar Motifs Found
motif file (matrix)
7 A G C T C T G A A G C T A C G T C A G T C A T G A T C G G T A C G C T A C T G A 1e-295-6.796e+0238.73%28.89%55.1bp (62.7bp)NFIA/MA0670.1/Jaspar(0.819)
More Information | Similar Motifs Found
motif file (matrix)
8 T G C A C G A T A C T G T G C A A C G T A T C G G C A T T G A C G C T A A C G T A G T C G C T A 1e-243-5.618e+0212.96%7.44%52.0bp (65.3bp)c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.915)
More Information | Similar Motifs Found
motif file (matrix)
9 G T A C A G T C C T A G A T G C A G T C A G T C C G A T A C T G 1e-206-4.760e+0229.18%21.65%56.0bp (64.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.726)
More Information | Similar Motifs Found
motif file (matrix)
10 G C T A T C A G C A G T G T C A T C G A T G C A G A T C T G C A 1e-196-4.531e+0224.82%17.93%55.8bp (63.7bp)Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer(0.949)
More Information | Similar Motifs Found
motif file (matrix)
11 T C A G C T A G A T C G T A G C G T A C C G T A C T A G A T G C A G T C G T A C 1e-183-4.214e+0236.39%28.71%55.3bp (64.7bp)POL010.1_DCE_S_III/Jaspar(0.706)
More Information | Similar Motifs Found
motif file (matrix)
12 C T A G C T A G C T G A C T G A C T G A C G T A C G A T T G C A C G A T A C T G C G T A T A G C 1e-182-4.204e+025.65%2.61%54.3bp (58.7bp)NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.842)
More Information | Similar Motifs Found
motif file (matrix)
13 T A C G A C G T A C G T C T G A A C G T A C T G G T C A C G T A C G T A A G C T 1e-174-4.014e+023.44%1.25%53.8bp (58.7bp)CEBPA/MA0102.3/Jaspar(0.901)
More Information | Similar Motifs Found
motif file (matrix)
14 A G T C A C T G A G T C G A C T C T A G T A C G T A G C G C T A C T A G T G A C 1e-163-3.760e+0227.84%21.22%55.5bp (67.6bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.850)
More Information | Similar Motifs Found
motif file (matrix)
15 A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A 1e-152-3.515e+029.25%5.49%55.2bp (67.9bp)CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.697)
More Information | Similar Motifs Found
motif file (matrix)
16 A T C G C A G T A C T G A G C T A G C T A C G T A G C T A G C T G A T C G A T C G C T A A C T G 1e-129-2.976e+0210.31%6.59%54.8bp (62.5bp)NFATC2/MA0152.1/Jaspar(0.738)
More Information | Similar Motifs Found
motif file (matrix)
17 T C G A T A G C G T A C C T A G T A C G T G C A C A G T T A C G T G C A T A G C 1e-116-2.685e+023.76%1.76%56.4bp (71.0bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.753)
More Information | Similar Motifs Found
motif file (matrix)
18 G T A C C T A G G T A C A G T C C G T A A G T C A C T G A C G T G T A C C G T A 1e-36-8.392e+010.19%0.02%54.8bp (5.7bp)CREB3/MA0638.1/Jaspar(0.898)
More Information | Similar Motifs Found
motif file (matrix)
19 T A C G A C G T C A G T T G C A A G C T A G C T A G T C G A C T A C G T C T A G C A T G T A G C 1e-22-5.175e+010.15%0.02%51.3bp (26.3bp)NFIC/MA0161.2/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)