Information for 23-GCGAAAGGTCCC (Motif 18)

A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C
Reverse Opposite:
A C T G C A T G T A C G T G C A T A G C G A T C A C G T A G C T A G C T G T A C T C A G T G A C
p-value:1e-36
log p-value:-8.306e+01
Information Content per bp:1.549
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets98.0 +/- 36.2bp
Average Position of motif in Background138.2 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A1/MA1112.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCGAAAGGTCCC
--AAAAGGTCAC
 A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C
A C G T A C G T C G T A C T G A C G T A G T C A A T C G T C A G A G C T G T A C C T G A G T A C

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCGAAAGGTCCC---
TCTCAAAGGTCACCTG
 A C G T A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCGAAAGGTCCC
ANGNAAAGGTCA-
 A C G T A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCGAAAGGTCCC---
TCTCAAAGGTCACGAG
 A C G T A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCGAAAGGTCCC-
--CAAAGGTCAAA
 A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C A C G T
A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCGAAAGGTCCC
NBYCAAGGTCAC
 A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGAAAGGTCCC-
GGAGAAAGGTGCGA
 A C G T A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCGAAAGGTCCC
----AAGGTCAC
 A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCGAAAGGTCCC
VNAGGKCAAAGGTCA-
 A C G T A C G T A C G T A C G T A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCGAAAGGTCCC
--TCAAGGTCAN
 A C T G A G T C C A T G T C G A T C G A T G C A C T A G A T C G A C G T A G T C G T A C T G A C
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C