Information for 25-CGTGGTTAAGGC (Motif 21)

A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C T G
p-value:1e-30
log p-value:-6.923e+01
Information Content per bp:1.530
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets102.0 +/- 43.9bp
Average Position of motif in Background70.3 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGTGGTTAAGGC
ACTAGTTAAC--
 A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTGGTTAAGGC
TACCCTAGTTACCGA
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGTGGTTAAGGC
GCTGTGGTTT----
 A C G T A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTGGTTAAGGC
NNTGTGGTTT----
 A C G T A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGTGGTTAAGGC
CTGTGGTTTN---
 A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGTGGTTAAGGC-
NNCGTTGCTATGGNN
 A C G T A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGTGGTTAAGGC
TGGGCGACGTCGTTAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGTGGTTAAGGC----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGTGGTTAAGGC
-GTGGAT-----
 A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CGTGGTTAAGGC-----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A