Information for 20-GCCTCGGA (Motif 33)

A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G C G T A A T C G C T A G A G T C
p-value:1e-5
log p-value:-1.253e+01
Information Content per bp:1.921
Number of Target Sequences with motif135.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif756.3
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets90.1 +/- 55.2bp
Average Position of motif in Background99.1 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCTCGGA
AGGCCTAG--
 A C G T A C G T A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCGGA
KGGCCYCWTD
 A C G T A C G T A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCTCGGA---
-CSTGGGAAAD
 A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTCGGA
AGGCCTNG--
 A C G T A C G T A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCGGA---
CAGGCCNNGGCCNN
 A C G T A C G T A C G T A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RBPJ/MA1116.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCTCGGA---
-CCTGGGAAAG
 A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCGGA-------
AAGATCGGAANTNNNA
 A C G T A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

ETV5/MA0765.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCTCGGA----
--ACCGGAAGTG
 A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCTCGGA----
--RCCGGAARYN
 A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCGGA--
TGCCTGAGGCN
 A C G T A C T G A G T C A T G C A C G T A G T C A C T G C T A G C G T A A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T