Information for 22-CAAAGTCTGT (Motif 24)

A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
Reverse Opposite:
C T G A A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.950
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif30.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets104.7 +/- 54.0bp
Average Position of motif in Background98.9 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAAAGTCTGT
--TWGTCTGV
 A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAAAGTCTGT
AAAACAAAGAA---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAAGTCTGT
VBSYGTCTGG
 A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAAGTCTGT-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAAAGTCTGT
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAAGTCTGT
--CTGTCTGG
 A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAAGTCTGT
NTCAAGGTCA--
 A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAAAGTCTGT---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAAGTCTGT
BTCAAGGTCA--
 A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAAAGTCTGT
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T A C T G G A C T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C