Information for 24-GGCAGAAGGCCA (Motif 29)

A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C A C G T A C G T A T G C C G A T A C T G A G T C G T A C
p-value:1e-5
log p-value:-1.289e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets100.1 +/- 60.1bp
Average Position of motif in Background114.3 +/- 78.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGCAGAAGGCCA-
TGGCACCATGCCAA
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGAAGGCCA--
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGAAGGCCA-
TGGCAGNCTGCCAG
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GGCAGAAGGCCA--
----CAAGGHCANV
 A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCAGAAGGCCA-
-NBYCAAGGTCAC
 A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGCAGAAGGCCA-
-----AAGGTCAC
 A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCAGAAGGCCA--
AAGTTCAAGGTCAGC
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGCAGAAGGCCA-
---TCAAGGTCAT
 A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCAGAAGGCCA
--NTCAAGGTCA
 A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCAGAAGGCCA
--BTCAAGGTCA
 A C T G A C T G A G T C C G T A A T C G C G T A C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A