Information for 20-GTCTAACG (Motif 30)

A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G
Reverse Opposite:
A G T C A T C G A C G T A C G T C G T A A C T G C G T A A G T C
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.944
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif182.1
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets99.6 +/- 53.3bp
Average Position of motif in Background95.4 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GTCTAACG---
GACNGTTTAACGGTT
 A C G T A C G T A C G T A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G A C G T A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTCTAACG---
AGNGTTCTAATGANN
 A C G T A C G T A C G T A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTCTAACG
TWGTCTGV--
 A C G T A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCTAACG
TGTCTAGA-
 A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAACG--------
NNANTAACGGTTNNNAN
 A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCTAACG--
--CTAATKGV
 A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G A C G T A C G T
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAACG--------
NNNNTAACGGTTNNNAN
 A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAACG---
TGTCTGDCACCT
 A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G A C G T A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTAACG
CTGTCTGG--
 A C G T A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTCTAACG
VBSYGTCTGG--
 A C G T A C G T A C G T A C G T A C T G C G A T A G T C A C G T C G T A C G T A A T G C A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T