Information for 5-GGTTAATSATTA (Motif 6)

C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A
Reverse Opposite:
G C A T C T G A G T C A C G A T A T G C C G T A A C G T A C G T C T G A T C G A T A G C G A T C
p-value:1e-20
log p-value:-4.632e+01
Information Content per bp:1.688
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif161.0
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets105.7 +/- 47.2bp
Average Position of motif in Background108.8 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:GGTTAATSATTA-
-GTTAATNATTAA
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A A C G T
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GGTTAATSATTA---
NGTTAATNATTAACN
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A A C G T A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.90
Offset:1
Orientation:forward strand
Alignment:GGTTAATSATTA--
-GTTAATGATTAAC
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A A C G T A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GGTTAATSATTA-
GGTTAAACATTAA
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGTTAATSATTA
-GKTAATGR---
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GGTTAATSATTA
----AATAATT-
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGTTAATSATTA
-NNTAATTANN-
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGTTAATSATTA
-GNTAATTANN-
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A
A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGTTAATSATTA
--TTAATTAN--
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGTTAATSATTA
-NNTAATTANN-
 C T A G A T C G A G C T G A C T C G T A G T C A G C A T T A C G G C T A A C G T G A C T C G T A
A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T