Information for 12-TTTTTGCGAA (Motif 15)

A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A
Reverse Opposite:
A C G T A C G T A T G C A C T G A T G C C G T A C T G A C G T A C G T A C G T A
p-value:1e-26
log p-value:-6.119e+01
Information Content per bp:1.873
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets122.8 +/- 63.4bp
Average Position of motif in Background102.7 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD12/MA0873.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTTGCGAA-
NTTTTACGACT
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTGCGAA--
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTTGCGAA-
NTTTTACGACC
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTTTGCGAA
NTTTTACGAC
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTTTGCGAA--
TTTCTNAGAAAN
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTTGCGAA-
NTTTTACGACC
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTTGCGAA-
NTTTTACGAGN
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTTTTGCGAA--
CATTTCCTGAGAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTTGCGAA--
TTCTNNAGAANT
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T A C G T
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTTTGCGAA-
TTTCCAGGAAA
 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A