Information for 9-CATGTTCC (Motif 18)

A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A G T C C G T A A C G T A C T G
p-value:1e-18
log p-value:-4.243e+01
Information Content per bp:1.530
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.75%
Number of Background Sequences with motif307.8
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets94.6 +/- 54.7bp
Average Position of motif in Background102.9 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CATGTTCC---
-CTGTTCCTGG
 A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATGTTCC---
-ATTTTCCATT
 A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CATGTTCC-
--TTTTCCA
 A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATGTTCC---
-ATTTTCCATT
 A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

SIX1/MA1118.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATGTTCC
TATCAGGTTAC
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CATGTTCC
GKVTCADRTTWC
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTTCC--
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTTCC--
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CATGTTCC---
----TTCCTCT
 A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATGTTCC-
TKCTGTTCCA
 A C G T A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C A C G T
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A