Information for 22-AGAGACAAGTTA (Motif 29)

C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
p-value:1e-3
log p-value:-9.151e+00
Information Content per bp:1.975
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.5 +/- 53.1bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAGACAAGTTA---
-AAGATAAGATAACA
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAGACAAGTTA
-AAGGCAAGTGT
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

GATA6/MA1104.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGACAAGTTA
AAAAGATAAGAAA
 A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A
C G T A C G T A T C G A G C T A T C A G C T G A C G A T C G T A C G T A T A C G T C G A C G T A C G T A

PH0107.1_Msx2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGACAAGTTA-----
GAAGACCAATTAGCGCT
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGACAAGTTA
NNGAGATAAGA--
 A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGAGACAAGTTA-----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

GATA2/MA0036.3/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGACAAGTTA
NNAGATAAGNN-
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A A C G T

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGACAAGTTA
ANAGATAAGAA-
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAGACAAGTTA-----
GAAAACTAGTTAACATC
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGAGACAAGTTA--
----ACTAGTTAAC
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C