Information for 6-GKAYCWYACM (Motif 8)

T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A
Reverse Opposite:
C A G T A T C G A G C T T C A G G C T A A T C G T C A G G C A T T G C A A T G C
p-value:1e-48
log p-value:-1.123e+02
Information Content per bp:1.519
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.45%
Number of Background Sequences with motif62.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets99.4 +/- 52.0bp
Average Position of motif in Background96.0 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GKAYCWYACM-
GCGACCACACTG
 A C G T T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GKAYCWYACM
--ACGTCA--
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GKAYCWYACM
-TACGTCAT-
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GKAYCWYACM--
-NNACTTACCTN
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A A C G T A C G T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GKAYCWYACM--
GGACCACCCACG
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Crem/MA0609.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GKAYCWYACM
TTACGTCATN
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GKAYCWYACM-
-KTTCACACCT
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A A C G T
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GKAYCWYACM-
-TTTCACACCT
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A A C G T
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GKAYCWYACM
-AAGGTCAC-
 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

JUN::JUNB(var.2)/MA1133.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GKAYCWYACM
NATGACGTCACA
 A C G T A C G T T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A
T G C A T G C A G A C T C A T G G T C A G A T C T C A G G C A T G T A C C G T A A G T C T G C A