Information for 13-GCAARATGGCGG (Motif 11)

T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G
Reverse Opposite:
A T G C A T G C A C T G A G T C A G T C G T C A A C G T G A T C A G C T G A C T T C A G A G T C
p-value:1e-29
log p-value:-6.871e+01
Information Content per bp:1.707
Number of Target Sequences with motif208.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif550.4
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets101.8 +/- 51.7bp
Average Position of motif in Background101.5 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.93
Offset:1
Orientation:forward strand
Alignment:GCAARATGGCGG-
-CAAGATGGCGGC
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.90
Offset:1
Orientation:forward strand
Alignment:GCAARATGGCGG-
-CAAGATGGCGGC
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:GCAARATGGCGG--
---TAATGGCGGNC
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

E2F3/MA0469.2/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAARATGGCGG-------
-AAAAATGGCGCCATTTTT
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCAARATGGCGG------
-NAGANTGGCGGGGNGNA
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCAARATGGCGG------
--AAAATGGCGCCATTTT
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

NEUROD1/MA1109.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAARATGGCGG
GGACAGATGGCAG
 A C G T T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAARATGGCGG
AACAGATGGC--
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCAARATGGCGG
---TNNGGGCAG
 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCAARATGGCGG---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T