Information for 17-YCACCCAAAGGC (Motif 15)

G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C
Reverse Opposite:
T A C G G T A C G T A C G C A T A G C T G A C T C A T G T C A G T C A G C G A T C T A G C T G A
p-value:1e-24
log p-value:-5.536e+01
Information Content per bp:1.569
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets113.0 +/- 65.2bp
Average Position of motif in Background84.4 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA(var.2)/MA0730.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---YCACCCAAAGGC--
AGGTCATGCAAAGGTCA
 A C G T A C G T A C G T G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T A C G T
T C G A A C T G A C T G A C G T G A T C T G C A G A C T A T C G A G T C C G T A T C G A T C G A C A T G A C T G A C G T A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:YCACCCAAAGGC--
TTGCCCTAGGGCAT
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---YCACCCAAAGGC--
AGGTCAACTAAAGGTCA
 A C G T A C G T A C G T G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T A C G T
T C G A A T C G C A T G A G C T A T G C C T G A G T C A T G A C A G C T C G T A C T G A C T G A T A C G A C T G A C G T A G T C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YCACCCAAAGGC-
-TGCCCCAGGGCA
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YCACCCAAAGGC--
CCGCCCAAGGGCAG
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YCACCCAAAGGC-
-TGCCCCCGGGCA
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:YCACCCAAAGGC-
-TGCCCCAGGGCA
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YCACCCAAAGGC--
--ANGNAAAGGTCA
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T A C G T
A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

NR4A1/MA1112.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:YCACCCAAAGGC---
-----AAAAGGTCAC
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A G T C A A T C G T C A G A G C T G T A C C T G A G T A C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YCACCCAAAGGC--
TCACCTCTGGGCAG
 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G