Information for 13-TTGTATAT (Motif 19)

A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A
p-value:1e-17
log p-value:-4.129e+01
Information Content per bp:1.530
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif191.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets95.8 +/- 58.3bp
Average Position of motif in Background96.0 +/- 70.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTGTATAT-
TATTGTTTATT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTGTATAT
TTGTTTAC
 A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTGTATAT
ATTTGCATAT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTGTATAT
TTGTTTAC
 A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTATAT---
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTGTATAT----
NTGTTTAYATWW
 A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTGTATAT-----
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTGTATAT-----
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTGTATAT-----
NANTTATATATAANGN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGTATAT
ATTGTTTAN
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C