Information for 22-GMCCTGCCGT (Motif 25)

A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T
Reverse Opposite:
C G T A A T G C A C T G C T A G A T G C C G T A A C T G A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.108e+01
Information Content per bp:1.887
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif239.1
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets84.5 +/- 53.0bp
Average Position of motif in Background97.6 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GMCCTGCCGT-
CCCCCTGCTGTG
 A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GMCCTGCCGT
SNGCACCTGCHS-
 A C G T A C G T A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GMCCTGCCGT--
NTGCCCANNGGTNA
 A C G T A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GMCCTGCCGT
----TGACGT
 A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GMCCTGCCGT--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GMCCTGCCGT----
NNTCCTGCTGTGNNN
 A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMCCTGCCGT
TGACCT-----
 A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMCCTGCCGT----
TNTCCTGCTGTGNNG
 A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMCCTGCCGT
NCACCTGTN--
 A C G T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GMCCTGCCGT--
--CCTGCTGAGH
 A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A