Information for 23-CACGTGAC (Motif 28)

A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C C G T A A G T C A C T G C G A T A C T G
p-value:1e-8
log p-value:-1.912e+01
Information Content per bp:1.920
Number of Target Sequences with motif193.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif813.5
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets101.8 +/- 57.1bp
Average Position of motif in Background91.2 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGAC-
NCACGTGACN
 A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A C G T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

TFE3/MA0831.2/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:CACGTGAC
CACGTGAC
 A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C
A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C

USF2/MA0526.2/Jaspar

Match Rank:3
Score:0.96
Offset:-4
Orientation:reverse strand
Alignment:----CACGTGAC----
NNGCCACGTGACCNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C T G T C A G T C A G G A T C T G A C C T G A A G T C T C A G A G C T A T C G C T G A A G T C G A T C G A T C T A G C T A C G

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAC
ATCACGTGAC
 A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAC-
GCCACGTGACC
 A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A C G T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGAC
ACCACGTGAC
 A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGAC-
TCACGTGACC
 A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A C G T
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAC
GTCACGTGAC
 A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGAC---
TCACGTGACCGG
 A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAC
ATCACGTGAC
 A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C